Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915841.1_cds_XP_016465606.1_58546
CDS Infomation

[gene=LOC107788438] [db_xref=GeneID:107788438] [protein=pentatricopeptide repeat-containing protein At4g16470-like] [partial=5'] [protein_id=XP_016465606.1] [location=complement(join(59189..59444,59589..59734,59982..60102,61164..61224,61339..>62242))] [gbkey=CDS]
Sequence

AAAGGTCTCTGTTTCTCTGGAAGGGTGGCTGAAGCAGTTGGAAGCTCTGGTGTACAGGTG
GAGTCAGAAACTTATTCCCTTGTTTTGCAAGAGTGCATTTTCCGGCAGGCGTATAAGAAA
GGGAAAAGAGTCCATTGGCAAATGATTGTTGTCGGCTTTGTTCCAAATGAGTATCTGACT
ATTAAGTTGTTAATTTTGTATGCAAAAGGAGGAGACCTGGATACCACACACATTATATTT
GATAAGTTGCAATTCAAATGCCTGGTTTCATGGAATGCTATGATTGCAGGATACGTGCAG
AAGGGTATGGAGGAAATAGGCCTGAGTCTCTACCATAATATGAAACAAAGAGGTGTACTT
CCAGATCAGTACACATTTGCATCAGTCTTTAGAGACTGTGCCTCTTTAGCAGTCCTGGAG
CAGGGCAAGCAAGCACATGCGCTGTTGATTAAAAGCCAAATTAGTGGAAATATTGTAGTT
AATAGTGCACTTATGGACATGTATTTCAAGTGTAGTTGTCCATCTGATGGCTATCTTGTG
TTTAGTAAGTCCTTGGAAAGGAATGTGATAACATGGACGGCTTTGATATCTGGGTATGGA
CAAAATGGAAGAATAAAAGACGTTCTGGAATCATTTCATAGGATGATAGATGAAGGATAT
AGGCCAAACCATATTACATTTCTTGCTGTTCTTTCTGCTTGTAGCCATGGGGGTTTGGTA
GATAGAGGTAAGGAGTATTTTTCATTGATGATGAGAGATTATGGGCTTCGACCCAGAGGA
AAACACTATGCAGCTATTGTGGATCTTCTAGGCCGTGCTGGAAGATTACAAGAGGCTCAT
GAGTTTGTCCAAAACTCCCGTTGCGGGGAGCACCCAGTATTATGGGGTGCCTTACTTGGG
GCTTGTTTATGGAACAACGTTGCAGAGGTAAGGAGACTGATGAAGGACTCAGGGGTGAAA
AAGGAAAGTGTAGCAATTATAAAGTCGGACAAGGATACAAGATATGGGTTGGATTCCATT
GTGACACATGATGGGGACAGATTGCCATGCTGGCCTTTAGCTAATCTATCGTCATTCAAA
CAGAGATTTGTGACTGTTACATGGTTTCAGTTAGAGGTCATTGGCATTGACGAAGCTCAG
TTTTTTGAGGATCTATATGATTTCTGCACAGAAGCTGCCGACCATGATGGCAAGATTGTG
ATAGTTGCTGGATTGGATGGTGACTATCTGAGAAGAAGCTTTGGTTCAGTTCTTGACATA
ATTCCAATTGCTGATACAGTGACCAAACTAACTTCTCGATGTGAACTTTGTGGTAAATGT
GCTTCTTTTACCTTGAGGAAGACAGAGGAGACGAGAACGGAGTTGATTGCAGGAGCAGAT
GTATATATGCCTGTGTGCCGAAAGCACTACGTGAGTGGACAAGTGGTCAAAGAGGCTACT
AGAAGTGTTCTTGAGTCTCATAAAGTTCGATGCAGCTCTGTTTTGTAA

Peptide Sequence

PEP ID

XP_016465606.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g16470-like, partial [Nicotiana tabacum]
Sequence

KGLCFSGRVAEAVGSSGVQVESETYSLVLQECIFRQAYKKGKRVHWQMIVVGFVPNEYLT
IKLLILYAKGGDLDTTHIIFDKLQFKCLVSWNAMIAGYVQKGMEEIGLSLYHNMKQRGVL
PDQYTFASVFRDCASLAVLEQGKQAHALLIKSQISGNIVVNSALMDMYFKCSCPSDGYLV
FSKSLERNVITWTALISGYGQNGRIKDVLESFHRMIDEGYRPNHITFLAVLSACSHGGLV
DRGKEYFSLMMRDYGLRPRGKHYAAIVDLLGRAGRLQEAHEFVQNSRCGEHPVLWGALLG
ACLWNNVAEVRRLMKDSGVKKESVAIIKSDKDTRYGLDSIVTHDGDRLPCWPLANLSSFK
QRFVTVTWFQLEVIGIDEAQFFEDLYDFCTEAADHDGKIVIVAGLDGDYLRRSFGSVLDI
IPIADTVTKLTSRCELCGKCASFTLRKTEETRTELIAGADVYMPVCRKHYVSGQVVKEAT
RSVLESHKVRCSSVL

Transcript Sequence

Gene sequence data has not been registered.